command line interface to upload a sample
when collection location is "Unknown", it reported error in cli but it works on Web interface.
czid short-read-mngs upload-sample -p 'wang_test_20230120' -s 'EE2_TreatA_Samp01Rep1' --metadata-csv metadata_template_Haibin_20230120.csv /scicomp/groups/OID/NCIRD/DVD/GRVLB/pdd/Projects/Disc_enrich_exp2_202211/edge_host_removed/EE2_TreatA_Samp01Rep1_R1.fastq.gz /scicomp/groups/OID/NCIRD/DVD/GRVLB/pdd/Projects/Disc_enrich_exp2_202211/edge_host_removed/EE2_TreatA_Samp01Rep1_R2.fastq.gz
replacing location "Unknown" with ""
found 1 errors and 0 warnings
errors:
1 samples are missing required metadata fields.
Row #: 1
Sample Name: EE2_TreatA_Samp01Rep1_1
Missing Fields: Collection Location
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